The main thing is to imagine the track or route your train will take on its journey.
For any given crossing/channel the train needs to pass-over the correct number of triggers. They don't have to be the same ones, just the correct number.
So if you're using the 2 Trigger Method the SPL/LCM event will happen as the train enters the first Trigger's radius. The SPL/LCM event will end, (the crossing will close) as the train leaves the second Trigger's radius, (no matter which side of the crossing that second Trigger is!). If it hits a third Trigger it will see that as a new arrival and start the crossing event again..... If it only hits one Trigger the cossing will stay open forever or until that particular train happens to stumble across another Trigger on the same channel.
Similarly, if you're using the 4 Trigger Method, plot a route for your train that passes-over (any) 4 Triggers. In this case, the train must 'leave' the 4th Trigger to re-set correctly.
You can also substitute a Driver Command for one of the Triggers if you like... but keep that mental train-route in mind for the correct number of Triggers/Commands.
Hope that helps,
Boat